Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015851151.1_cds_XP_016511402.1_24146
CDS Infomation

[gene=LOC107828574] [db_xref=GeneID:107828574] [protein=pentatricopeptide repeat-containing protein At1g53600, mitochondrial-like] [protein_id=XP_016511402.1] [location=complement(join(33866..33992,34044..34239,34525..36661))] [gbkey=CDS]
Sequence

ATGCTAGCAAAGCCGAACTTCTTACATGTCCGCCTACGTTTGCCTTTCTCAGAATTTGCG
CTTCCGAATCTTAAATACTCAACTTCTTCAAACACCCTTTTGAACGCCGGCGCTAAAACA
AACAAATTCTTGATTTATTGTAACACCCAGATCGCACATAATGGCCGAAACGGAAACATT
AAAGAAGCTGAATCCGTTTTCAACCGTATGCCCACCAAAAATATCGTTTCTTGGACCGCA
ATGCTTACGGCATATTCCCAAAACGGGCAACTCAAGAAAGCTCGTGCACTGTTCGATGAA
ATGCCTGAAAGAAGTGTCGCTTCGTGGAATGCGATGCTGACGGCTTATATGAGGAATAGA
GTTGAAATTGATGGGATATTCAGTTTTTTTCAGCTGATGCCGGAGAGAAATTCGGTGTCT
TTTGCGGCGATGATTACGGGGTTTGTTAATGCAGGGAGGTTTGATATGGCGGAGAATTTG
TATAATCGGACTCCTATGGTTTTGCGGGAACCTGTTTGTTCGAATGTACTGATAAATGGG
TATTTGAAAGTTGGAAAGTTAGACGATGCAGTTCGTGTTTTTGATGGTATGGTTCGAAAA
GATATTGTTTCTTGTAGTGCAATGATTGATGGGAACTGCAAGAATGGGAGAGTTATTGAG
GCTCGGGAGTTGTTTAATGCGATGAAAGAGAAGAATGGGGTCACTTGGGGTGCTATGATT
GATGGGTATATGAAAGTTTGCTGTTTCGGAGATGGGTTTGAATTGTTTCTAAGAATGAGA
AGGGAAGGTGATGCGAGACTGGAGCCTACTATAATAACAATCATTTTAGAAGCTTGTGGA
AGATTTAGTAAGCATCAGCAAGGTTATCAAGTCCATGGACTGGTTACTCGCTTGGGTTTT
GAATTTGATGTTTTCTTGGGTAATTCATTGATCACTATGTACTCTAGATTTGGTTGTGTA
GATGCAGCTAAATGTGTGTTTGATTCGATGTTCAGGAAAGATGTCATTTCGTGGAATTCT
CTTATTACTGCTTTTGTTCAAGCTGGAAATCTTGAAGAGGGATATGAGCTTTTTAAAAGG
GCTCCGGAAAAGGATGTTGTTTCTTGGACAGCCATGATCACAGGGTTTTCTGAAAAAGGG
TTGACTGAAAAATGTGTTGATCTATTTGCAATGATTCCCGAGAAAGATGATGTTGCATGG
ACAACTCTTATCTCTAGTTTTGTAAATAAAGGGGAATATGAGGAGGCTTTTCGCTGGTTT
ATTAAAATGCTTCAAAGTGCCGTTAGACCAAATCCTCTAACTTTAAGTAGTATACTTAGT
GCTTCAGCTGGTCTGGCAATGTTAAATCAAGGTCTGCAAATTCATGCTTGTGTTATGAAA
ATGAATATGGAGTTAGATTTGTCTATCCAAAGTTCTCTTATCTCAATGTATTCCAAGTCT
GGAAGTTTAGATGATGCCTACAGGATCTTTAAATTCATAAATTTCCCGAATATTGTTTGT
TTCAATGCAATGATTACTGGATTTGCCCAAAATGGCTATGGCAAAGAAGCACTTAAGTTG
TTTGACCAGTTGCGGAATGAAGGTGAGCAACCTAATGGTATCACTTTTCTAGGGGTACTT
TCAGCCTGTATGCATGCTGGGCTCGTAGAAGAAGGATGGAACTACTTCAAATCCATGAGA
TCATTATACAACATTGAACCGGAGCCTGATCATTATACTAGCATGGTTGATATCCTCGGA
CGAGCTGGTTTACTTGATGAAGCAGTTGATCTAATAAATTCGATGCCATTCAAGACACAT
TCTGGTGTTTGGGGTGCTCTTCTAGCTGCCAGCAAGACTCACTTGCGTCTTGATCTTGCA
AAGCTTGCAGCTCATAGAATTTTGGACTTGGAACCAAGTAGTGCAGCTCCTTACGTGGTC
TTGTCAGACCTGTATTGCATTGTCAGAAAGAAGAAAGATGAGGAACAAGTTAGGCTGGCA
AAGAAATTGAAAAGAATAAAGAAATATCCAGGTTGCAGTTGGGTTTTGTTGAAAAACAAC
GTTGGTTTATTTCTCTGCGGAGATCAGTCCCATTTGAACTTTAAAGAGATCAGCTGCACA
TTGTGGACAATTATGGATGAAATGAAACAATTAAGTTCATTTGGCAAGTGGAATTATGAA
AAGATTGCCATCCTGACATCGAATCAGCGAGATGATGATATGTCAATTTTCTCCATAGTT
CAAAAGGTGGTTCATAGTTATCATCACTTGCATGGTCCTCCTGTTAATGTTTTACTGCGG
AGATACAGAATGTACAGCTCGCCCTTCTATAGAGAGGTGGCCGTTTCTCCCAGAGAGGTA
GAGTTAGGAGCTCAACATTGGAAGAGTGGCCTCACTTATCTTCGGGAAATCGAGTTAGCT
ATTGTGGCTGTTTATCACGCAAAGTGTATTTTGAGGCCATTTATTCACTCAATAGGTTAG

Peptide Sequence

PEP ID

XP_016511402.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g53600, mitochondrial-like [Nicotiana tabacum]
Sequence

MLAKPNFLHVRLRLPFSEFALPNLKYSTSSNTLLNAGAKTNKFLIYCNTQIAHNGRNGNI
KEAESVFNRMPTKNIVSWTAMLTAYSQNGQLKKARALFDEMPERSVASWNAMLTAYMRNR
VEIDGIFSFFQLMPERNSVSFAAMITGFVNAGRFDMAENLYNRTPMVLREPVCSNVLING
YLKVGKLDDAVRVFDGMVRKDIVSCSAMIDGNCKNGRVIEARELFNAMKEKNGVTWGAMI
DGYMKVCCFGDGFELFLRMRREGDARLEPTIITIILEACGRFSKHQQGYQVHGLVTRLGF
EFDVFLGNSLITMYSRFGCVDAAKCVFDSMFRKDVISWNSLITAFVQAGNLEEGYELFKR
APEKDVVSWTAMITGFSEKGLTEKCVDLFAMIPEKDDVAWTTLISSFVNKGEYEEAFRWF
IKMLQSAVRPNPLTLSSILSASAGLAMLNQGLQIHACVMKMNMELDLSIQSSLISMYSKS
GSLDDAYRIFKFINFPNIVCFNAMITGFAQNGYGKEALKLFDQLRNEGEQPNGITFLGVL
SACMHAGLVEEGWNYFKSMRSLYNIEPEPDHYTSMVDILGRAGLLDEAVDLINSMPFKTH
SGVWGALLAASKTHLRLDLAKLAAHRILDLEPSSAAPYVVLSDLYCIVRKKKDEEQVRLA
KKLKRIKKYPGCSWVLLKNNVGLFLCGDQSHLNFKEISCTLWTIMDEMKQLSSFGKWNYE
KIAILTSNQRDDDMSIFSIVQKVVHSYHHLHGPPVNVLLRRYRMYSSPFYREVAVSPREV
ELGAQHWKSGLTYLREIELAIVAVYHAKCILRPFIHSIG

Transcript Sequence

Gene sequence data has not been registered.